Pumpkin Cream Cheese Muffins
These Pumpkin Cream Cheese Muffins are moist, spiced, and filled with a rich cream cheese swirl that makes each bite taste like autumn. Perfect for breakfast, snacks, or as a cozy treat with coffee or tea, these muffins are bakery-style but easy to prepare at home.
Why You’ll Love This Recipe
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Combines the warm flavors of pumpkin spice with a creamy cheesecake-like filling.
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Moist, fluffy texture with a tender crumb.
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Ideal for fall gatherings, brunch, or make-ahead breakfasts.
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Freezer-friendly and easy to store.
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No special equipment required—just simple ingredients and a muffin tin.
Ingredients
(Tip: You can find the complete list of ingredients and their measurements in the recipe card below.)
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Pumpkin puree
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All-purpose flour
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Granulated sugar
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Brown sugar
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Vegetable oil
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Eggs
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Baking powder
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Baking soda
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Salt
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Ground cinnamon
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Ground nutmeg
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Ground cloves
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Cream cheese
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Vanilla extract
Directions
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Preheat oven to 350°F (175°C) and line a muffin tin with paper liners.
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In a large mixing bowl, whisk together pumpkin puree, sugar, brown sugar, oil, and eggs until smooth.
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In another bowl, combine flour, baking powder, baking soda, salt, cinnamon, nutmeg, and cloves.
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Gradually fold the dry ingredients into the wet ingredients until just combined. Do not overmix.
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In a separate bowl, beat cream cheese with sugar and vanilla until smooth.
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Fill each muffin cup about 2/3 full with the pumpkin batter. Add a spoonful of cream cheese mixture on top. Use a toothpick to swirl slightly if desired.
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Bake for 18–22 minutes, or until a toothpick inserted in the center comes out clean.
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Allow muffins to cool in the pan for 5 minutes before transferring to a wire rack.
Servings and timing
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Servings: 12 muffins
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Prep time: 15 minutes
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Cook time: 20 minutes
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Total time: 35 minutes
Variations
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Add chocolate chips for a richer flavor.
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Use a streusel topping for extra crunch.
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Substitute pumpkin spice blend in place of individual spices.
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Try whole wheat flour for a slightly denser, healthier version.
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Add chopped pecans or walnuts for a nutty texture.
Storage/Reheating
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Store muffins in an airtight container in the refrigerator for up to 5 days.
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Freeze muffins individually wrapped in plastic wrap and stored in a freezer bag for up to 2 months.
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To reheat, microwave for 20–30 seconds or warm in the oven at 300°F (150°C) for about 10 minutes.
FAQs
How do I make the cream cheese filling smooth?
Ensure your cream cheese is softened at room temperature before mixing. Beat until no lumps remain.
Can I use homemade pumpkin puree?
Yes, homemade puree works well, but make sure it is thick and not watery to avoid soggy muffins.
Do I need to swirl the cream cheese layer?
Swirling is optional; you can also leave it as a distinct layer for a cheesecake-like bite.
Can I make these muffins gluten-free?
Yes, substitute a 1:1 gluten-free flour blend for the all-purpose flour.
Are these muffins freezer-friendly?
Yes, they freeze very well for up to 2 months.
Can I reduce the sugar?
Yes, but keep in mind it may alter the texture and sweetness slightly.
Can I use low-fat cream cheese?
Regular cream cheese provides the best texture, but low-fat cream cheese can be used with a slightly different consistency.
How do I prevent muffins from sticking to the liners?
Use parchment paper liners or lightly spray the liners with nonstick spray.
Can I make these into mini muffins?
Yes, reduce the baking time to about 10–12 minutes.
What should I serve with these muffins?
They pair perfectly with coffee, chai tea, or a glass of warm milk.
Conclusion
Pumpkin Cream Cheese Muffins bring together the best of fall flavors in a moist, spiced muffin with a rich and creamy center. Simple to make and versatile with many variations, they are a delightful treat for breakfast, dessert, or snacks throughout the season.
PrintPumpkin Cream Cheese Muffins
Soft and moist pumpkin muffins swirled with a rich cream cheese filling, perfect for fall mornings or festive gatherings.
- Prep Time: 15 mins
- Cook Time: 20 mins
- Total Time: 35 mins
- Yield: 12 muffins 1x
- Category: Breakfast, Dessert
- Method: Baking
- Cuisine: American
- Diet: Vegetarian
Ingredients
- 1 3/4 cups all-purpose flour
- 1 cup granulated sugar
- 1/2 cup packed brown sugar
- 1 tsp baking soda
- 1/2 tsp baking powder
- 1/2 tsp salt
- 1 1/2 tsp ground cinnamon
- 1/2 tsp ground nutmeg
- 1/2 tsp ground cloves
- 1/4 tsp ground ginger
- 2 large eggs
- 1 cup canned pumpkin puree
- 1/2 cup vegetable oil
- 1 tsp vanilla extract
- 8 oz cream cheese, softened
- 1/3 cup granulated sugar (for cream cheese filling)
- 1 egg yolk
- 1/2 tsp vanilla extract (for filling)
Instructions
- Preheat oven to 350°F (175°C) and line a 12-cup muffin tin with paper liners.
- In a large bowl, whisk together flour, sugar, brown sugar, baking soda, baking powder, salt, cinnamon, nutmeg, cloves, and ginger.
- In another bowl, whisk eggs, pumpkin puree, vegetable oil, and vanilla until smooth.
- Pour wet ingredients into dry ingredients and stir until just combined. Do not overmix.
- In a small bowl, beat softened cream cheese, sugar, egg yolk, and vanilla until smooth and creamy.
- Fill muffin cups about 2/3 full with pumpkin batter.
- Spoon about 1 tablespoon of cream cheese filling into the center of each muffin and swirl gently with a toothpick or knife.
- Bake for 18–22 minutes, or until a toothpick inserted into the muffin (not the cream cheese center) comes out clean.
- Let muffins cool in the pan for 5 minutes, then transfer to a wire rack to cool completely.
Notes
- For extra flavor, sprinkle muffins with cinnamon sugar before baking.
- Store leftovers in an airtight container in the refrigerator for up to 4 days.
- These muffins can also be frozen for up to 2 months.
Nutrition
- Serving Size: 1 muffin
- Calories: 260
- Sugar: 21g
- Sodium: 210mg
- Fat: 13g
- Saturated Fat: 6g
- Unsaturated Fat: 6g
- Trans Fat: 0g
- Carbohydrates: 33g
- Fiber: 1g
- Protein: 4g
- Cholesterol: 45mg
Keywords: pumpkin cream cheese muffins, fall baking, pumpkin spice muffins, cream cheese swirl muffins